[gt-users] New feature announcement
Sascha Steinbiss
steinbiss at zbh.uni-hamburg.de
Wed Nov 26 20:09:11 CET 2008
Hi everyone,
I am happy to announce that there is an official beta version of the
next GenomeTools release with some substantial improvements to the
feature set of the AnnotationSketch library.
It is now possible to take more control over layout details to further
customise the output. For example, blocks can now arbitrarily assigned
to tracks (which can be created on the fly) based on individual block
properties (see http://genometools.org/trackselectors.html) instead of
just the type. Furthermore, it is possible to use the internal Graphics
object to draw to something called custom tracks. Custom tracks (see
http://genometools.org/customtracks.html) are an extension of a generic
AnnotationSketch track in which free user-defined drawing of arbitrary
shapes (e.g. generated from any data source which can be accessed from
Python) is allowed.
Also, there is a new 'rectangle' feature style and support for
specifying an alpha value for every color has been added.
The URLs above point to short tutorials on how to use this functionality
in practice. I am also still working on extending the FeatureNode
bindings to include everything in the feature_node_api.h, and more is to
come soon.
In the meantime, I will be happy to get feedback on the new features.
Feel free to pull from the official repository at
git://genometools.org/genometools.git and have a look at what is new.
Best regards,
Sascha Steinbiss
--
Sascha Steinbiss
Zentrum für Bioinformatik
Universität Hamburg
Bundesstr. 43
20146 Hamburg
Germany
Email: steinbiss at zbh.uni-hamburg.de
URL: http://www.zbh.uni-hamburg.de/steinbiss
Phone: +49 (40) 42838 7322
FAX: +49 (40) 42838 7312
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