[gt-users] problem building genometools 1.3.0 on x86_64 (ubuntu 8.04.2)

[Gordon Gremme]

Hi James,

could you try genometools-unstable.tar.gz? That should work.

Gordon


On Wed, Apr 22, 2009 at 12:30 PM, James Casbon <casbon at gmail.com> wrote:
> Hi,
>
> Anyone got this to build under 64 bit linux?  For some reason it
> doesn't like my bz2 libraries :(
>
> james at datarig:/data/tranche2/ext/genometools-1.3.0$ cat /etc/issue
> Ubuntu 8.04.2 \n \l
>
> james at datarig:/data/tranche2/ext/genometools-1.3.0$ uname -a
> Linux datarig 2.6.24-23-server #1 SMP Thu Nov 27 18:45:02 UTC 2008
> x86_64 GNU/Linux
> james at datarig:/data/tranche2/ext/genometools-1.3.0$ make
> [link libgenometools.so]
> /usr/bin/ld: skipping incompatible
> /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../libbz2.so when searching
> for -lbz2
> /usr/bin/ld: skipping incompatible
> /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../libbz2.a when searching
> for -lbz2
> /usr/bin/ld: skipping incompatible /usr/bin/../lib/libbz2.so when
> searching for -lbz2
> /usr/bin/ld: skipping incompatible /usr/bin/../lib/libbz2.a when
> searching for -lbz2
> /usr/bin/ld: skipping incompatible /usr/lib/libbz2.so when searching for -lbz2
> /usr/bin/ld: skipping incompatible /usr/lib/libbz2.a when searching for -lbz2
> /usr/bin/ld: cannot find -lbz2
> collect2: ld returned 1 exit status
> make: *** [lib/libgenometools.so] Error 1
>
>
> thanks,
> James
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